Journal Publications

• Davies, J., Glasgow, J and Kuo, T, ``Visuo-spatial Case-Based Prediction of Protein Structure", Journal of Computational Intelligence, in press.
• Glasgow, J., Kuo, T. and Davies, J., ``Protein Structure from Contact Maps: A Case-Based Reasoning Approach", Information Systems Frontiers, Volume 8, Number 1: 29-36, Special Issue on Knowledge Discovery in High-Throughput Biological Domains, Springer, January 2006.
• Jurisica, I. and Glasgow, J., ``Knowledge Discovery in High-Throughput Domains", Information Systems Frontiers, Volume 8, Number 1: 5-7, Special Issue on Knowledge Discovery in High-Throughput Biological Domains, Springer, January 2006.
• Biname, J. Meurice, N., Leherte, L., Glasgow, J., Fortier, S. and Vercauteren, D., ``Use of Electron Density Critical Points as Chemical Function-oriented Reduced Representations of Pharmocological Ligands", Journal of Chemical Information and Computer Science (JCICS), 2004, pp 1394-1401.
• Jurisica, I. and Glasgow, J., ``Applications of Case-Based Reasoning in Molecular Biology", AI Magazine, Spring 2004, pp 85-96.
• Glasgow, J. Jurisica, I. and Rost, B., ``AI and Bioinformatics", AI Magazine Editorial, Spring 2004, pp 7-8.
• Glasgow, J. and Rost, B., ``Editorial", Bioinformatics Journal, August 2002.
• Sultan, M., Wigle, D.A., Cumbaa, C.A., Maziarz, M., Glasgow, J., and Jurisica, I., ``Binary Tree-Structured Vector Quantization Approach to Clustering and Visualizing Microarray Data", Bioinformatics Journal, Vol. 18, Suppl. 1, 2002.
• Jurisica, I., Rogers, P., Glasgow, J., Collins, R., Wolfley, J., Luft, J. and DeTitta, G., ``Improving Objectivity and Scalability in Protein Crystallization: Integrating Image Analysis with Knowledge Discovery", Intelligent Systems in Biology, Special Issue, IEEE Intelligent Systems, 26-34 November/December 2001.
• Luft, J.R., Wolfley, J., Jurisica, I., Glasgow, J., Fortier, S. and DeTitta, G., ``Macromolecular Crystallization in a High Throughput Laboratory - the Search Phase", Journal of Crystal Growth, Vol. 232, 591-595, 2001.
• Jurisica, I., Rogers, P., Glasgow, J., Fortier, S., Luft, J., Wolfley, J., Bianca, M., Weeks, D. and DeTitta, G., ``Intelligent Decision Support for Crystal Growth", IBM Systems Journal (Special Issue on Deep Computing for the Life Sciences), pp. 394-409, Vol. 40, No. 2, 2001.
• Jurisica, I., Glasgow, J.I. and Mylopolous, J., ``Incremental Iterative Retrieval and Browsing for Efficient Conversational CBR Systems." International Journal of Applied Intelligence, Vol. 12, pp. 251-268, 2000.
• Egenhofer, M., Glasgow, J., Gunther, O., Herring, J. and Peuquet, D., ``Progress in Computational Methods for Representing Geographical Concepts", International Journal of Geographical Information Science, Vol. 13, No. 8, pp. 775-796, December 1999.
• Glasgow, J.I., ``A Computational Approach to Integrating Language and Vision", International Journal of Psychology, Special issue on Psychology and Cognitive Science, Vol. 33, No. 6, pp. 421-437, 1998.
• Jurisica, I., Mylopoulos, J., Glasgow, J., Shapiro, H. and Casper, R.F., ``Case-Based Reasoning in IVF: Prediction and Knowledge Mining", AI in Medicine Journal, Vol. 12, No. 1, pp. 1-24, 1998.
• Leherte, L., Glasgow, J.I., Fortier, S., Baxter, K. and Steeg, E., ``Analysis of Three-Dimensional Protein Images", Journal of AI Research (JAIR), No. 7, pp. 125-159, 1997.
• Jurisica, I. and Glasgow, J.I., ``Improving Performance of Case-Based Classification Using Context Based Relevance", International Journal on Artificial Intelligence Tools, Special Issue of ICTAI Best Papers, Vol. 6, pp. 511-536, 1997.
• Feret, M. and Glasgow, J.I., ``Combining Case-Based and Model-Based Reasoning for the Diagnosis of Complex Devices", Applied Intelligence, Vol. 7, No. 1, pp. 58-78, 1997.
• Feret, M. and Glasgow, J.I., ``A Formal Model for Experience-Aided Diagnosis", Computational Intelligence, Vol. 13, No. 2, May 1997.
• Conklin, D., Fortier, S., Glasgow, J.I. and Allen, F.H., ``Conformational Analysis from Crystallographic Data Using Conceptual Clustering", Acta Crystallographica, B52, pp. 535-549, 1996.
• Leherte, L., Fortier, S., Glasgow, J.I. and Allen, F., ``Molecular Scene Analysis: A Topological Approach to the Automated Interpretation of Protein Electron Density Maps", Acta Crystallographica, D50, pp. 155-166, 1994.
• Glasgow, J.I., ``The Imagery Debate Revisited: A Computational Perspective", Computational Intelligence (Taking issue position paper), Vol. 9, No. 4, pp. 309-333, 1993.
• Glasgow, J.I., ``Imagery and AI: Where Do We Go From Here?" (Response to taking issue forum), Computational Intelligence, Vol. 9, No. 4, pp. 424-435, 1993.
• Fortier, S., Castleden, I., Glasgow, J.I., Conklin, D., Walmsley, C., Leherte, L. and Allen, F.H., ``Molecular Scene Analysis: The Integration of Direct Methods and Artificial Intelligence Strategies for Solving Protein Crystal Structures", Acta Crystallographica, Section D (Biological Crystallography), pp. 168-177, January, 1993.
• Conklin, D., Fortier, S. and Glasgow, J.I., ``Knowledge Discovery in Molecular Databases", IEEE Transactions on Knowledge and Data Engineering, Special Issue on Learning and Discovery in Knowledge-Based Databases (Correspondence Paper), pp. 985-987, December 1993.
• Glasgow, J.I. and Papadias, D., ``Computational Imagery", Cognitive Science, 17, No. 3, pp. 355-394, 1992. Reprinted in 1) Diagrammatic Reasoning, MIT Press, 1995 and 2) Mind Readings: Introductory Selections on Cognitive Science, 1998, MIT Press.
• Glasgow, J.I., MacEwen, G.H. and Panangaden, P., ``A Logic for Reasoning About Security", ACM Transactions on Computing Systems, Vol. 10, No. 3, pp. 226-264, August, 1992.
• Crowe, C., Douglas, P.L., Glasgow, J.I. and Mallick, S.K., ``Development of an Expert System for Process Synthesis", Trans IChemE, Vol. 70, Part A, March 1992.
• Allen, F.A., Rowland, S., Fortier, S. and Glasgow, J.I., Knowledge Acquisition from Crystallographic Databases: A Knowledge-Based Approach to Molecular Scene Analysis'', Tetrahedron Computer Methodology, Vol. 3, pp. 757-774, Pergamon Press Ltd., 1992.
• Blevis, E., Burke, R., Glasgow, J.I. and Duncan, N., ``The Life Analysis and Depreciation Integrated Exemplar System (LADIES)'', International Journal of Expert Systems, Special issue on Case-based Reasoning, Vol. 4, No. 2, pp. 141-156, 1992.
• Glasgow, J.I., Jenkins, M.A., Blevis, E. and Feret, M., ``Logic Programming with Arrays", IEEE Transactions on Knowledge and Data Engineering, Vol. 3, No. 3, pp. 307-319, September 1991.
• Glasgow, J.I. and MacEwen, G.H., ``An Operator Net Model for Distributed Systems," Distributed Computing, Vol. 3, No. 4, pp. 196-209, 1989.
• Glasgow, J.I., Jenkins, M.A., McCrosky, C. and Meijer H., ``Expressing Parallel Algorithms in Nial", Parallel Computing, Vol. 11, No. 3, pp. 331-347, 1989.
• Jenkins, M.A. and Glasgow, J.I., ``A Logical Basis for Nested Array Data Structures", Programming Languages Journal, Vol. 14, No. 1, pp. 35-49, 1989.
• Skillicorn, D.B., and Glasgow, J.I., ``Real-Time Specification Using Lucid", IEEE Transactions on Software Engineering, Vol. 15, No. 2, pp. 221-229, February 1989.
• Glasgow, J.I. and MacEwen, G.H., ``The Development and Proof of a Formal Specification for a Multi-level Secure System," ACM Transactions on Computer Systems, Vol. 5, No. 2, pp. 151-184, May 1987.
• Glasgow, J.I., Jenkins, M.A. and Hendren, L.J., ``A Programming Language for Learning Environments," Computational Intelligence, Special issue on AI Approaches to Education, pp. 68-75, May 1986.
• Jenkins, M.A., Glasgow, J.I. and McCrosky, C., ``Programming Styles in Nial", IEEE Software, pp. 46-55, January 1986.
• Glasgow, J.I. and Browse, R.A., ``Programming Languages for Artificial Intelligence", International Journal of Computers and Mathematics with Applications, Special issue on Practical Artificial Intelligence Systems, Vol. 11, No. 5, pp. 431-449, May 1985.