Time
|
Title
|
Authors
|
9:00-9:10
|
Introduction
|
Gene Identification
|
9:10-9:30
|
From Gene Names to
Actual Genes
|
I. Korkontzelos, A. Vlachos, and
I. Lewin
|
9:30-9:50
|
Resolution of Coordination Ellipses in Complex
Biological Named Entity Mentions Using Conditional Random Fields
|
E. Buyko, K. Tomanek, and U. Hahn
|
9:50-10:10
|
An
Investigation into the Reusability of Biomedical
Terminologies
for the Resolution of Referential
Expressions
|
M. Poprat and U. Hahn
|
10:10-10:30
|
Exploiting Synonym Relationships in Biomedical
Named Entity Matching
|
V. Ha-Thuc and P.
Srinivasan
|
10:30-11:00 Coffee Break
|
11:00-12:00
|
BioCreative Report and Discussion
|
BioCreative Organizers
|
12:00-13:00 Lunch
|
13:00-13:20
|
Filtering Bioentity
Recognition Errors in Bioliterature using a Case-based Approach
|
F.M. Couto, T. Grego, R.
Torres, P. Sanchez, L. Pascual and C. Blaschke
|
Corpora and Annotation
|
13:20-13:40
|
Efficient
Annotation with the Jena Annotation Environment
|
K. Tomanek, J. Wermter, and U. Hahn
|
13:40-14:00
|
An Annotated Biological
Corpus
|
J. Pustejovsky, J. Castaño, M. Kotecki and B. Cochran
|
14:00-14:20
|
ProSpecTome: A New Tagged
Corpus for Protein Named Entity Recognition
|
R. Kabiljo, D. Stoucheva and
A.J. Shepherd
|
14:20-14:30
|
10 Minutes Break
|
Relationship Extraction
& Other Applications
|
14:30-14:50
|
Multi-dimensional Classification of Biomedical
Text Fragments : Toward Utility-Based Text Mining
|
H. Shatkay, F. Pan, A.
Rzhetsky and W.J. Wilbur
|
14:50-15:10
|
Domain-Neutral Relation Characterisation: Evaluation
on Disease-Treatment Data
|
B. Hachey
|
15:10-15:30
|
Learning Information Extraction Patterns from
Biomedical Text
|
M. Padrón, R. Torres, A.
Valencia and C. Blaschke
|
15:30-16:00 Coffee
Break
|
16:00-16:20
|
Interactive Medline
Search Engine Utilizing Biomedical Concepts and Data Integration
|
W. Xuan, M. Dai, B. Mirel,
B. Athey, S.J. Watson and F. Meng
|
16:20-17:20
|
Discussion
|
16:20-16:30
|
Short Poster
Advertisements
|
17:30-18:30
|
Poster
Session
|
|